发明名称 Biological unit segmentation with ranking based on similarity applying a geometric shape and scale model
摘要 Embodiments of the disclosure are directed to segmenting a digital image of biological tissue into biological units, such as cells. A first weak or data driven segmentation is generated using image data representing the digital image to segment the digital image into a first set of biological units. Applying a geometric model, each unit in the first set of biological units is ranked based on a similarity in shape and scale between the unit and one or more other units in the image. A subset of units from the first set of biological units is selected based on the rank of each biological unit relative to a predetermined threshold rank. A second weak or data driven segmentation may then be generated using image data including the subset of biological units to segment that portion of the digital image into a second set of biological units.
申请公布号 US9589360(B2) 申请公布日期 2017.03.07
申请号 US201213666343 申请日期 2012.11.01
申请人 GENERAL ELECTRIC COMPANY 发明人 Huang Yuchi;Santamaria-Pang Alberto;Rittscher Jens
分类号 G06K9/00;G06T7/00;G06K9/44 主分类号 G06K9/00
代理机构 Fletcher Yoder, P.C. 代理人 Fletcher Yoder, P.C.
主权项 1. An unsupervised computer-implemented method of segmenting a digital image of biological tissue, the computer including a processor, the method comprising acts of: generating, by the processor, a first weak unsupervised data driven segmentation of the digital image of the biological tissue to segment the digital image into a first set of biological units where the biological units are the boundary of each cell of the biological tissue; assigning, by the processor, an unsupervised individual rank to each biological unit in the first set of biological units based on a similarity in shape and scale between the biological unit and one or more other biological units in the first set of biological units, wherein a geometric model is used to define the similarity as a function of a weighted sum of the similarity in shape and scale between each biological unit and the one or more other biological units; and selecting, by the processor, a subset of biological units from the first set of biological units, where the subset of biological units are boundaries of cells in the biological tissue, based on the unsupervised individual rank of each biological unit relative to a predetermined threshold rank; generating, by the processor, a second weak unsupervised data driven segmentation of only a portion of the digital image including the subset of biological units to segment the portion of the digital image into a fully unsupervised second set of biological units; and repeating the acts of assigning the rank, selecting the subset and generating the second weak unsupervised data driven segmentation until an average change in the rank of substantially all of the biological units in the digital image is no greater than a predetermined threshold level subsequent to the act of generating the second weak unsupervised data driven segmentation, wherein the second weak or data driven segmentation is different each time the second weak or data driven segmentation is generated.
地址 Niskayuna NY US