System and method for processing reference sequence for analyzing genome sequence

摘要

Provided are systems and methods for processing a reference sequence. Exemplary systems for processing a reference sequence may include a seed extractor configured to extract a seed from a reference sequence; a determiner configured to determine whether an unidentified base is present or absent in a seed extracted by the seed extractor; and an index generator configured to add a seed to an index when unidentified bases are absent from an extracted seed.

主权项

1. An apparatus for processing a reference sequence, comprising:
at least one hardware processor; computer-readable memory, said memory comprising one or more programs, executed by the at least one hardware processor, which comprise commands for: extracting a seed from a reference sequence; determining whether an unidentified base is present or absent in the extracted seed; and adding the seed to an index when unidentified bases are absent from said extracted seed.