Capture compounds and methods for analyzing the proteome

摘要

A capture compound and a method of identifying drug target non-target proteins in a mixture of proteins is provided, comprising the steps of interacting the mixture with a capture compound of the formula Q-Z-( Xm)-Yn, wherein Z is a trivalent moiety for presenting X, Y and Q; moiety X is selected to covalently bind to proteins; moiety Y is a pharmaceutical drug, drug fragment, drug metabolite, prodrug, enzyme substrate, enzyme inhibitor, transition-state analogue or a ligand to a receptor; Q is a sorting function selected to permit physical arraying or other addressable separation method suitable for analysis, Q comprises a biotin moiety, a (His) 6 moiety, a BODIPY moiety (4, 4-difluoro-4-bora-3a, 4a-diaza-s-indacene), an oligonucleotide or PNA (peptide nucleic acid), an antibody, an immunotoxin conjugate, an adhesive peptide, a lectin, an activated dextran or a peptide; and analyzing the captured proteins to identify drug target or drug non-target.