发明名称 Method for producing second-generation library
摘要 The present invention relates to a method for generating a second-generation library. In a first step, a library of encoded molecules associated with an identifier nucleic acid comprising codons identifying chemical entities that have participated in the formation of the encoded molecule is provided. In a second step, the library is partitioned and encoded molecules having a certain property are selected. Codons of identifiers of selected encoded molecules are subsequently identified, and a second-generation library is prepared using at least some of the chemical entities coded for by the identified codons. The new focussed library may be used for another partition step to select encoded molecules with a certain property.
申请公布号 US9096951(B2) 申请公布日期 2015.08.04
申请号 US201113179283 申请日期 2011.07.08
申请人 Nuevolution A/S 发明人 Freskgard Per-Ola;Gouliaev Alex Haahr;Thisted Thomas;Olsen Eva Kampmann
分类号 C40B50/06;C40B40/08;B01J19/00;C12N15/10;C12Q1/68;C40B50/10;C40B50/04 主分类号 C40B50/06
代理机构 Merchant & Gould P.C. 代理人 Merchant & Gould P.C.
主权项 1. A method for producing a focused library comprising a plurality of different molecules, wherein each molecule is linked to an identifier oligonucleotide comprising tags identifying a plurality of reactants that participated in formation of the molecule, the method comprising the steps of: i) producing an initial library comprising a plurality of different initial molecules, wherein each initial molecule is linked to an identifier oligonucleotide comprising tags identifying a plurality of reactants that participated in formation of the initial molecule, the initial library having a higher diversity than the focused library, and wherein said initial library is produced by a split-and-mix method comprising the steps of: a. providing, in separate compartments, a plurality of nascent bifunctional complexes each comprising a chemical reaction site and a priming site, and reacting the nascent bifunctional complexes at their chemical reaction sites with one or more reactants; b. reacting the priming sites of the plurality of nascent bifunctional complexes with one or more tags, wherein the reaction between the priming site and the one or more tags is catalyzed by an enzyme; wherein steps (a) and (b) provide a plurality of intermediate bifunctional complexes having a modified chemical reaction site containing a structural entity formed from the chemical reaction site and the one or more reactants and a modified priming site containing the one or more tags; c. pooling the intermediate bifunctional complexes into a single compartment to provide a mixture, and splitting the mixture into separate compartments d. reacting each compartment containing a mixture of intermediate bifunctional complexes with one or more additional reactants at the modified reactant sites and one or more additional tags identifying the one or more additional reactants at the modified priming sites using the methods of steps (a) and (b); and e. optionally repeating steps (c) and (d) as many times as desired ii) subjecting said initial library to a partitioning step, wherein said partitioning step provides a partitioned library synthesized from some, but not all, of the plurality of reactants used in the synthesis of the initial library, and iii) identifying the reactants used in the synthesis of at least some of the molecules of the partitioned library, iv) producing a focused library having a lower diversity than the initial library, wherein said focused library is produced by a split-and-mix method comprising the steps of: a. providing at least some of the reactants used in the synthesis of the molecules of the partitioned library, b. providing either i) at least some, but not all, of the reactants used in the synthesis of the initial library but not used in the synthesis of the partitioned library, and/or ii) further reactants not used in the synthesis of the initial library, c. reacting the reactants provided in steps (iv)(a) and (iv)(b) in a split-and-mix method comprising the steps cited in (i)(a)-(i)(e); and d. producing the focused library comprising a plurality of different molecules.
地址 Copenhagen DK