发明名称 |
Computer-implemented biological sequence identifier system and method |
摘要 |
A method of: submitting reference sequences to a taxonomic database to produce taxonomic results; and reporting a taxonomic identification based on the taxonomic results. The reference sequences are the output of genetic database queries that return a score for each reference sequence. A method for processing a biological sequence obtained from an assay by: converting base calls located in a predetermined list of positions within the biological sequence to N; and determining the ratio of single nucleotide polymorphisms in the biological sequence relative to a reference sequence. Each entry in the predetermined list of positions represents the capability of a substance hybridizing to a microarray used to generate the biological sequence. The substance is not the nucleic acid of a target pathogen.
|
申请公布号 |
US7979446(B2) |
申请公布日期 |
2011.07.12 |
申请号 |
US20090617025 |
申请日期 |
2009.11.12 |
申请人 |
THE UNITED STATES OF AMERICA AS REPRESENTED BY THE SECRETARY OF THE NAVY |
发明人 |
MALANOSKI ANTHONY P.;LIN BAOCHUAN;SCHNUR JOEL M;STENGER DAVID A |
分类号 |
G06F7/00;G06F17/30 |
主分类号 |
G06F7/00 |
代理机构 |
|
代理人 |
|
主权项 |
|
地址 |
|