APPARATUS AND METHOD FOR COMPARING PROTEIN STRUCTURES USING PRINCIPAL COMPONENTS ANALYSIS AND AUTOCORRELATION

摘要

Provided is an apparatus and method for comparing structures of proteins by extracting main axes of the proteins using principal components analysis (PCA), dividing regions using grids into voxels for precise structure alignment, and placing the proteins respectively in the regions to calculate a similarity between the proteins by autocorrelation. The apparatus for comparing protein structures using principal components analysis (PCA) and autocorrelation includes: a PCA calculator for receiving a query protein for extracting a main axis of the query protein; a voxel generator for receiving information about the main axis from the PCA calculator and dividing a predetermined region using a grid to determine whether the divided region is occupied by the query protein for generating voxels of the query protein; and a comparison processor for performing an autocorrelation calculation between voxels of one protein and voxels of the other protein that are generated by the voxel generator.