| 发明名称 |
METHODS AND SYSTEMS FOR BIOLOGICAL SEQUENCE ALIGNMENT |
| 摘要 |
A method for transforming a plurality of random biological sequence data to an ordered biological data sequence, the method comprises reading a reference biological data sequence; generating a plurality of indexes based on the reference biological data sequence; generating a library, the library including the plurality of indexes; organizing the library into an associative array; reading the plurality of random biological sequence data; encoding the plurality of random biological sequence data; comparing the encoded plurality of random biological sequence data to the reference biological sequence; and aligning the encoded plurality of random biological sequence data to the reference biological sequence using an alignment algorithm to generate a plurality of alignment data. |
| 申请公布号 |
US2017068776(A1) |
申请公布日期 |
2017.03.09 |
| 申请号 |
US201515123281 |
申请日期 |
2015.03.04 |
| 申请人 |
ARC BIO, LLC |
发明人 |
Godinez-Moreno Ricardo;Quiroz-Zarate Alejandro;Coste Pablo G.;Olivares-Amaya Roberto;Watson, Jr. Thomas J. |
| 分类号 |
G06F19/12 |
主分类号 |
G06F19/12 |
| 代理机构 |
|
代理人 |
|
| 主权项 |
1. A method for transforming a plurality of random biological sequence data to an ordered biological data sequence, the method comprising:
reading a reference biological data sequence; generating a plurality of indexes based on the reference biological data sequence; generating a library, the library including the plurality of indexes; organizing the library into an associative array; reading the plurality of random biological sequence data; encoding the plurality of random biological sequence data; comparing the encoded plurality of random biological sequence data to the reference biological sequence; and aligning the encoded plurality of random biological sequence data to the reference biological sequence using an alignment algorithm to generate a plurality of alignment data. |
| 地址 |
Cambridge MA US |
