主权项 |
1. A computer system-implemented method for storing and presenting sequence data, comprising:
determining, by a computer system, for a genome-related sequence, whether specified replets have matching subsequences of the sequence; generating and storing in a non-transitory computer readable storage medium, by the computer system, a match-set data structure having respective entries for ones of the replets having matching subsequences, each entry comprising a first and second position parameter, the first position parameter of each match-set data structure entry denoting a location in the sequence and the second position parameter of each match-set data structure entry denoting an offset from the location; forming and storing in a non-transitory computer readable storage medium, by the computer system, a backbone sequence from unmatched regions of the sequence; and updating, by the computer system, the first and second position parameters of the entries in the match-set data structure for a selected at least first one of the replets that has a matching subsequence, wherein the selected at least first one of the replets has a position within the sequence and wherein the updating is responsive to the position of the selected at least first one of the replets, the updating being performed to make match-set entries valid for non-chosen replets. |