发明名称 System and method for repetitive element array extraction in large size DNA sequence
摘要 For extracting a repetitive element arrangement, a preprocessing part extracting a plurality of input information formed by paring first information which is forward information with second information which is reverse information by preprocessing inputted arrangements, a seeding part generating a seed for the repetitive element arrangement through the input information, and an expanding part extracting the repetitive element arrangement by using the seed generated by the seeding part. The seeding part includes a word matching part generating a lookup table from the extracted input information by using a word generated according to a preset word length and a seed generating part generating the seed by using the word of the lookup table. [Reference numerals] (111) First information extraction unit;(112) Filtering unit;(113) Second information extraction unit;(121) Matching unit;(122) First seed generation unit;(123) Second seed generation unit;(124) Seed storage unit;(131~1,131~2,131~n,132~1,132~2,132~n) Expander;(AA) Base sequence
申请公布号 KR101400229(B1) 申请公布日期 2014.05.30
申请号 KR20120044901 申请日期 2012.04.27
申请人 发明人
分类号 C12Q1/68;G06F19/10 主分类号 C12Q1/68
代理机构 代理人
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