发明名称 Methods of amplifying whole genome of a single cell
摘要 Methods and compositions for amplifying the whole genome of a single cell are provided.
申请公布号 US9617598(B2) 申请公布日期 2017.04.11
申请号 US201214122341 申请日期 2012.05.22
申请人 President and Fellows of Harvard College 发明人 Xie Xiaoliang Sunney;Zong Chenghang;Lu Sijia
分类号 C12Q1/68;C12P19/34;C12N15/10 主分类号 C12Q1/68
代理机构 Banner & Witcoff, Ltd. 代理人 Banner & Witcoff, Ltd.
主权项 1. A method of amplifying the whole genome of a single cell comprising (a) providing genomic DNA from the single cell in single stranded form in a reaction vessel; (b) adding primers having a common sequence, a variable sequence and a fixed sequence to the reaction vessel to produce a reaction mixture, wherein the common sequence includes G, T and A but not C, (c) subjecting the reaction mixture to a low temperature at which annealing of the primers to the single stranded genomic DNA takes place, (d) adding at least one of a DNA polymerase having strand displacement activity or 5′ to 3′ exonuclease activity to the reaction mixture and subjecting the reaction mixture to a temperature at which DNA amplification takes place to produce single or double stranded DNA, (e) subjecting the reaction mixture to a temperature to produce single stranded amplicons, (f) optionally subjecting the reaction mixture to a temperature to anneal free primer to the 3′ end of amplicons thereby maintaining a linear structure to prevent the formation of chimeras, (g) repeating steps (c) to (f) to produce amplicons of the genomic DNA, and (h) analyzing the genomic DNA for congenital disorders or known phenotypical consequences including whole chromosome level abnormalities, chromosome translocations, aneuploidy, deletion or duplication of part or the whole chromosome, beta-thalassaemia Down's syndrome cystic fibrosis, sickle cell disease, tay-sachs disease, fragile X syndrome, spinal muscular atrophy, haemoglobinopathies, alpha-thalassemia, X-linked disorders (disorders determined by genes on the X chromosome), spina bifida, anencephaly, congenital heart defects, obesity, diabetes, cancer, fetal gender, fetal RHD, fetal HLA haplotype, paternally derived mutations, or chromosomal aneuploidy.
地址 Cambridge MA US