发明名称 Methods for identifying and using organ-specific proteins in blood
摘要 The present invention relates generally to methods for identifying organ-specific secreted proteins and for identifying organ-specific molecular blood fingerprints therefrom. As such, the present invention provides compositions comprising such proteins, detection reagents for detecting such proteins, and panels, and arrays for determining organ-specific molecular blood fingerprints.
申请公布号 US9002652(B1) 申请公布日期 2015.04.07
申请号 US200611342366 申请日期 2006.01.27
申请人 Institute for Systems Biology 发明人 Hood Leroy;Lin Biaoyang
分类号 G01N33/48;C12Q1/70;G01N33/68;G06K9/00 主分类号 G01N33/48
代理机构 Pabst Patent Group LLP 代理人 Pabst Patent Group LLP
主权项 1. A method for identifying a set of at least 5 organ-specific proteins that are specifically produced in a preselected organ and are shed into the blood comprising, (a) determining, using mRNA transcripts, the sequences of sequences 17-20 nucleotides long that have been identified as signature sequences characteristic of mRNA transcripts that encode proteins from substantially all mRNA transcripts isolated from a sample of said preselected organ; (b) comparing, using a computer, the signature sequences to a database of known RNA transcripts to identify the mRNA transcripts that encode proteins to obtain a preliminary set of mRNA transcripts; (c) comparing, using a computer, the identified mRNA transcripts to mRNA transcripts known to be expressed in other organs; (d) removing, using a computer, from said preliminary set any mRNA transcripts that are known to be substantially expressed in other organs thus obtaining an intermediate set of mRNA transcripts; (e) identifying, using a computer, from the remaining mRNA transcripts in the intermediate set those mRNA transcripts that include a sequence encoding a signal peptide, thereby identifying transcripts that encode organ-specific secreted proteins from said preselected organ; and (f) confirming, using a blood sample, the presence of the organ-specific secreted proteins by assessing the blood sample, thereby identifying a set of at least 5 organ-specific proteins from said preselected organ that are shed into blood.
地址 Seattle WA US