发明名称 SYSTEM AND METHOD FOR ALIGNING GENOME SEQUENCE
摘要 A system and method for aligning a genome sequence are provided. The system for aligning a genome sequence includes a seed generation unit configured to generate a plurality of seeds from an input read, a filtering unit configured to map the generated seeds to a reference sequence and select target seeds for global alignment from the mapped seeds in consideration of gaps between the mapped seeds, and an alignment unit configured to perform a global alignment of the read with the reference sequence in mapping positions in which the selected seeds are mapped to the reference sequence.
申请公布号 US2014379271(A1) 申请公布日期 2014.12.25
申请号 US201414309608 申请日期 2014.06.19
申请人 SAMSUNG SDS CO., LTD. 发明人 PARK Min Seo
分类号 G06F19/22 主分类号 G06F19/22
代理机构 代理人
主权项 1. A system for aligning a genome sequence, comprising: a seed generation unit configured to generate a plurality of seeds from an input read to provide generated seeds; a filtering unit configured to map the generated seeds to a reference sequence to provide mapped seeds, and to select from the mapped seeds target seeds for a global alignment operation, in consideration of gaps between the mapped seeds; and an alignment unit configured to perform the global alignment operation of the input read, with the reference sequence, in mapping positions in which the target seeds are mapped to the reference sequence wherein one or more of the seed generation unit, the filtering unit, and the alignment unit is implemented using a hardware processor.
地址 Gangnam-Gu KR