PURPOSE: A fuel cell system for a ship is provided to improve efficiency by powering a blower using the high-pressure fuel of a fuel gas supply system (FGS). CONSTITUTION: A fuel cell system (100) for a ship comprises a turbine (110) and a blower (120). The turbine is powered by using boll-off gas (BOG) and liquefied natural gas (LNG) of an LNG tank (130) as fuel. The blower is connected to the turbine to be powered when the turbine is powered. The blower is powered using the BOG and LNG. [Reference numerals] (AA) Air; (BB) Water; (CC) Exhaust; (DD) Power; (EE) Main propulsion