发明名称 Assay methods using nicking endonucleases
摘要 Assay methods and apparatus for the analysis of biopolymers are disclosed. The assays employ nicking endonucleases to enable the generation of flaps on target biomolecules which are detected in nanopore or fluidic channel devices. Identification of flap locations enables a map of the target biomolecule to be derived.
申请公布号 US9434981(B2) 申请公布日期 2016.09.06
申请号 US201414199434 申请日期 2014.03.06
申请人 NABSYS 2.0 LLC 发明人 Oliver John S.
分类号 C12Q1/68 主分类号 C12Q1/68
代理机构 Goodwin Procter LLP 代理人 Goodwin Procter LLP
主权项 1. A method for preparing and analyzing a target analyte, the method comprising: a. providing a double-stranded DNA template having first and second DNA strands, each strand having a 5′ end and a 3′ end, b. contacting the template with a nicking endonuclease to form nicks at sequence-specific locations on the first DNA strand, c. conducting a first base extension reaction on the first DNA strand along the corresponding region of the second DNA strand, said reaction starting at each nick and progressing toward the 3′ end of the first DNA strand to thereby form single-stranded flap regions on the double-stranded DNA template adjacent to the sequence-specific nicking locations, d. conducting a second base extension reaction on at least one flap region to form at least one double-stranded flap, to thereby prepare the target analyte, e. translocating the target analyte through a fluidic channel, the fluidic channel comprising at least a pair of detector electrodes defining a detection volume therein, and e. monitoring changes in an electrical property across a fluidic channel as the target analyte is translocated therethrough, the changes in the electrical property being indicative of double-stranded regions of the target analyte and of the single-stranded flap regions.
地址 Providence RI US