发明名称 |
Gene finding using ordered sets |
摘要 |
A method, system and computer program product for identifying occurrences of a sequence of ordered marker strings in a string are disclosed. The method includes the steps of identifying sub-strings in the string that match the marker, for each marker string except the last marker string in the ordered sequence of marker strings creating directed links between a sub-string that matches a particular marker string and all the sub-strings that match a subsequent marker string in the ordered sequence of marker strings, and identifying occurrences of the sequence in the string by tracing one or more corresponding paths from each sub-string that matches the first marker string to all sub-strings that match the last marker string by following the directed links. The method, system and computer program product disclosed particularly relate to finding a gene in a DNA sequence.
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申请公布号 |
US7158889(B2) |
申请公布日期 |
2007.01.02 |
申请号 |
US20020324509 |
申请日期 |
2002.12.20 |
申请人 |
INTERNATIONAL BUSINESS MACHINES CORPORATION |
发明人 |
HUSSAN JAGIR R.;JHONEY ALBEE |
分类号 |
G01N33/48;C12Q1/00;C12Q1/68;G01N33/50;G06F7/60;G06F19/00 |
主分类号 |
G01N33/48 |
代理机构 |
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代理人 |
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主权项 |
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地址 |
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